PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65025.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 337aa    MW: 38056.7 Da    PI: 8.2408
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.91e-49221472128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
                 +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ +++++ +++
  PKA65025.1  22 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAFAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKNESLKAI 119
                 79***************************.89***************8777899***************************************999*** PP

         NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                 glkktLvfy+g+apkg +t+W+m+eyrl
  PKA65025.1 120 GLKKTLVFYTGKAPKGIRTSWIMNEYRL 147
                 **************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MAIAAAMSNE QGKDDHEHDL VMPGFRFHPT EEELIEFYLR RKVEGKRFNV ELITFLDLYR  60
YDPWELPAFA AIGEKEWFFY VPRDRKYRNG DRPNRVTTSG YWKATGADRM IKNESLKAIG  120
LKKTLVFYTG KAPKGIRTSW IMNEYRLPQS QLAENELLKA EISLCRVYKR AGVDDHHCRI  180
QPRSTSKSSS SSSSPNSSKH SDASHDHPSS SFTPLPQGVG FPPNTNKISN QGQLTLQPTS  240
SILEEDHPLI VHLPKNTDSN WSNNSPISLY PSPSSITMAA ADELHMLVGF NQSYMQPVVQ  300
SSVYNSTVPV SLSTISEKLW EWNALSHAAG RDHSNSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.15e-98NAC family protein