PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA65385.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

E2F/DP

Protein Properties

Length: 197aa MW: 21110.1 Da PI: 9.8102

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA65385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	27	7.6e-09	145	180	1	39
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedv 39 r+++sL+llt+kf++ll+++++gi++ln++a++L +v PKA65385.1 145 RYDSSLGLLTKKFISLLKHAQDGILDLNKAAETL---EV 180 6899*****************************9...54 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MSGGRAAGSR PTPPPGQIFH QLKRNLPLSS SRPPFVSPDE YHQFSPVISH REATAEGVVS 60 IAIKTPLKRK AVREANDAAE LNEWTDSPGC AEVDSSSLLT PVSGKVGRNY CRSKVAKHNK 120 SGPQTPLSNA GSPSSNLLTP VSTCRYDSSL GLLTKKFISL LKHAQDGILD LNKAAETLEV 180 RLAAPLLCPK QLFVAMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.3	2e-37	E2F/DP family protein