PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65486.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 207aa    MW: 22595.3 Da    PI: 9.4834
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.81.3e-2963122159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +C+vkkkv+rs ed ++++ tYegeHnh+
  PKA65486.1  63 VKDGYQWRKYGQKVTRDNPSPRAYFRCSFApSCTVKKKVQRSVEDRSILVATYEGEHNHR 122
                 58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MSSAPETRKR RSESQESRES NGEANKGESL SSEDSYKRMR VDSKTCLSKI CARTDPSDST  60
LVVKDGYQWR KYGQKVTRDN PSPRAYFRCS FAPSCTVKKK VQRSVEDRSI LVATYEGEHN  120
HRPPLQGEAP AGRAGHGGSS STQVPAVSMN SASSGTITVD LACREMASPE FQRILIEQMA  180
ASLAKDPTFK ASLASAISGR IFELPPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1712TRKRRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-62WRKY family protein