PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65597.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 266aa    MW: 30351.3 Da    PI: 6.045
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM176.38.7e-55111381129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtdee++++yL +kv ++ +++ ++++evd+ k ePwdLp+k+k +e+ewyfF++rd+ky+tg+rknrat+sgyWkatg+d+e+++ ++ l
  PKA65597.1  11 LPPGFRFHPTDEEIITHYLSPKVLNHGFSA-RAVAEVDLRKNEPWDLPSKAKMGEEEWYFFCQRDRKYPTGTRKNRATESGYWKATGRDREIYRGTELL 108
                 79**************************99.88***************99999*****************************************99999 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129
                 vg++ktLvfy grap+gekt+W+mhe+rle
  PKA65597.1 109 VGMRKTLVFYLGRAPRGEKTNWIMHEFRLE 138
                 ***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MAAMEDDALF LPPGFRFHPT DEEIITHYLS PKVLNHGFSA RAVAEVDLRK NEPWDLPSKA  60
KMGEEEWYFF CQRDRKYPTG TRKNRATESG YWKATGRDRE IYRGTELLVG MRKTLVFYLG  120
RAPRGEKTNW IMHEFRLEGE GQTSAMDEWV VCRVFHKNAG GIKTEISSFT DHHHELLELP  180
MLPPLNPYFS MTPEMCSPAP LPPSSPASNW WSQSNWRHCK SEQFSSQSVR SWETGIISPD  240
LSMEISSAAA DAGDGLVFGL ENLWGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07680.18e-84NAC family protein