PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65639.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 205aa    MW: 22625.9 Da    PI: 8.4839
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.26.6e-2182131255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    r  r +lg+f+taeeAa+a++ a+ +++g
  PKA65639.1  82 KYRGVRQRP-WGKWAAEIRDPR----RaVRKWLGTFDTAEEAARAYDLAAIEFRG 131
                 8********.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MDPATAFPSL LRLRLSPEQE TSIIVATLRH VISGHSAADA APEIPFPPAD ICLASRFKDE  60
AASSMVEVKV DGGRRRPKKK NKYRGVRQRP WGKWAAEIRD PRRAVRKWLG TFDTAEEAAR  120
AYDLAAIEFR GARAKLNFPF PDRNPAAAGG DLQGASAVAS PPSLSSQPVV LQPEAVKMEE  180
FWDVLQLQEL LPPDEVAMSD IWMLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.17e-25ERF family protein