PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA65776.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 449aa MW: 49215.1 Da PI: 7.6259

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA65776.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.3	4.4e-51	87	215	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yL+kkv +k++l +vi++vd++k+ePwd+++k++ +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk +++ + PKA65776.1 87 VPPGFRFHPTEEELLNYYLRKKVGCEKIDL-DVIRDVDLNKLEPWDIQEKCRIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYT-S 183 69**************************.9***********964443122456**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ktLvfykgrap+g+k+dW+mheyrl PKA65776.1 184 FKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 215 889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MHLGSTLSPP QYRRVREHPC VKGVSAVASR LLSLTLSLSE AATLVMQHRP CGASKLPKSL 60 FSIHPFLRSN IASVPAMSIS VDGQSSVPPG FRFHPTEEEL LNYYLRKKVG CEKIDLDVIR 120 DVDLNKLEPW DIQEKCRIGS TPQNDWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKVI 180 YTSFKRIGMR KTLVFYKGRA PHGQKSDWIM HEYRLDEHSD STSLSTGSCA AADSPAQEEG 240 WVVCRVFKKK NIQKAIESSN NTSTITNDHH NIKNHLVHSS TDSALEQILQ YMGRSCKQER 300 EAFSTSPNSA AASAAEAGAS SGGHYLRYFR PIDAIFGEAE RFMKLPALES PTLPVNIPAE 360 NYSCSSYHAE VSNVESSADH RQEAAGLSDW AAVDRLVACH LNGDDVNAFG FCTSAGTSAG 420 AAGEVDGDLW SLAASTASDS ISHVSHASI

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MHLGSTLSPP QYRRVREHPC VKGVSAVASR LLSLTLSLSE AATLVMQHRP CGASKLPKSL  60
FSIHPFLRSN IASVPAMSIS VDGQSSVPPG FRFHPTEEEL LNYYLRKKVG CEKIDLDVIR  120
DVDLNKLEPW DIQEKCRIGS TPQNDWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKVI  180
YTSFKRIGMR KTLVFYKGRA PHGQKSDWIM HEYRLDEHSD STSLSTGSCA AADSPAQEEG  240
WVVCRVFKKK NIQKAIESSN NTSTITNDHH NIKNHLVHSS TDSALEQILQ YMGRSCKQER  300
EAFSTSPNSA AASAAEAGAS SGGHYLRYFR PIDAIFGEAE RFMKLPALES PTLPVNIPAE  360
NYSCSSYHAE VSNVESSADH RQEAAGLSDW AAVDRLVACH LNGDDVNAFG FCTSAGTSAG  420
AAGEVDGDLW SLAASTASDS ISHVSHASI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-104	NAC family protein