PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65788.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 324aa    MW: 34814.5 Da    PI: 10.3653
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY993e-31253310359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D+++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeH+h+
  PKA65788.1 253 DEFSWRKYGQKPIKGSPYPRGYYKCSSLrGCPARKHVERAPDDPSMLIVTYEGEHRHS 310
                 99************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MAVDLMGYAK MEEQTSFQEA AAAGIRSMEN LIFQLNHHHH KPSSYSASSA SAPIDCRDLA  60
DHTVSKFKKM IAILNRTGHA RFRRGPVSAF SPAAITAAPP QPVPVVQLQS LTLDFTKPVS  120
VGSGSTDRAV VAGATGQYVK ENFSITTPIS SANSSFMSTI TGDGSVSNGR QGSSSLLLPP  180
APAISAGAAH PGKPPLSSGY NKRCHSHAHS DGIAGKFTAS GGRCHCPKRR KNRVKRTIRV  240
PAISSKMADI PPDEFSWRKY GQKPIKGSPY PRGYYKCSSL RGCPARKHVE RAPDDPSMLI  300
VTYEGEHRHS QTSVPLVLNA DREI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-103WRKY family protein