PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65795.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GATA
Protein Properties Length: 265aa    MW: 28403.9 Da    PI: 7.2214
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17180216135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cgt+   Tp++Rrgpdg++tLCnaCGl+++ kg+
  PKA65795.1 180 CHHCGTSAkeTPMMRRGPDGPRTLCNACGLMWANKGT 216
                 ******9999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MSESPSQPAG EEPLTGETEG HEDTAVGLAV MEGDVHSDPG SALAAPSGSQ LTLSFQGEVY  60
VFDCVSPEKV QSVLLLLGGR EVAAPMPSPT SSTSQLNRRL NFPHRVASLM RFREKRKERN  120
FDKKIRYDVR KEVALRMQRN KGQFTSSKSK PEDSMAGFTS ADSTSPLIGE NGLPQTASAC  180
HHCGTSAKET PMMRRGPDGP RTLCNACGLM WANKGTLRDL SKSPLPNQHA MEIKDGVGGL  240
SASLNNGTSA EHHLVITSNG LDVSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-77GATA family protein