PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65812.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 316aa    MW: 35203.3 Da    PI: 10.2169
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM106.92.5e-335814147128
         NAM  47 LpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 L +k+k +ekewy+Fs +d+ky+tg r+nratk+gyWk+tgkdke++++  + el+g+kktLvfykgrap+gekt+Wvmheyrl
  PKA65812.1  58 LARKAKVGEKEWYYFSIKDRKYPTGVRTNRATKAGYWKTTGKDKEIYDSthRFELIGMKKTLVFYKGRAPRGEKTNWVMHEYRL 141
                 3337778999**************************************8656677***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MPPDVGGSTI TVSAKPLQVT ASTNKANVVV HRPATMYYRR MVPSLSDNYK RTELYMSLAR  60
KAKVGEKEWY YFSIKDRKYP TGVRTNRATK AGYWKTTGKD KEIYDSTHRF ELIGMKKTLV  120
FYKGRAPRGE KTNWVMHEYR LQPKSNILRE NKHQDEWVVC RVFQKSSAAG GKKQLAAGQL  180
HHRLIPYALN VASRPAVIPS LLATSSTYCH PPTLNRGTAA TTTAETVDLI RYRNMQPILQ  240
TQLDFPAGNF SPLPAATLNL NLGGPPPPPV VVGCIPVAEP ELAGDGGGGA NGRSTRYLNV  300
EPCMDLEGYW NRNNYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.21e-50NAC family protein