PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65820.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family CPP
Protein Properties Length: 63aa    MW: 7012.08 Da    PI: 7.8477
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR49.11.1e-151450238
         TCR  2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkN 38
                ++kgCnC ks+C+k YCeC++ag+ C   C+Ce+CkN
  PKA65820.1 14 QRKGCNCLKSQCMKDYCECYKAGVGCYVGCRCEGCKN 50
                689********************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 63 aa     Download sequence    
MQDNSLSPPT LTIQRKGCNC LKSQCMKDYC ECYKAGVGCY VGCRCEGCKN FYGTKDGMFE  60
SNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22760.12e-18CPP family protein