PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65935.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 193aa    MW: 19956.2 Da    PI: 6.6631
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65935.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.000376486123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C+ Cgk F++   L  H  +H
  PKA65935.1 64 HRCSVCGKAFPSYQALGGHKTSH 86
                79**********99998888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MIAVGATESL ATQPQHPPDS TTSSGDSPEE ENVAHCLLML GQDGNGAAFD HPPGVILPSP  60
KVNHRCSVCG KAFPSYQALG GHKTSHRIKS TVGGDHRLSG AGSPEASSGS GGGKVHQCSI  120
CSKCFPTGQA LGGHKRCHYY GTIGSAAGVR IRPFDLNLPP ATDFAFDSGG GPWGPVEEDE  180
VQSPLRRMAV DVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.19e-29C2H2 family protein