PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA65936.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 236aa    MW: 24625.7 Da    PI: 8.0188
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA65936.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.0002979101123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 +kC+ Cgk F++   L  H  +H
  PKA65936.1  79 HKCSVCGKAFPSYQALGGHKASH 101
                 79**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MAMEAFRPAA SETSSEESLR PMDGWTKRKR SKRHPRFFDH QPTEEEYLAF CLLMLARDGS  60
AAAAAASGDR VPAPPSLDHK CSVCGKAFPS YQALGGHKAS HRKPILGSAG GVAVGDDRLS  120
AGSPAASSSS STAGGRVHQC QICLKTFPTG QALGGHKRCH YDGTIGSAAG AGFSASAAAS  180
ASSEAAIAGA RGFDLNLPAA PDQFALEIVR RCWMPEEEDE VQSPLPLKKP CLSITA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-41C2H2 family protein