PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66155.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 399aa MW: 44879.8 Da PI: 7.0157

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	99.5	4.9e-31	58	200	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee....vikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyW 83 lp+G++F+P+d el+ e+L+ kv + +++ +i++++ i++++P++Lp +k++ ++++fF++++++y+tg+rk+r+ +s +W PKA66155.1 58 LPAGVKFDPSDAELL-EHLNGKVGMGNAKAHIlideFIPTLEgdqgICYTHPKNLP-GIKKDGSSVHFFHRTSNAYSTGHRKRRKihnqcsefDDSVRW 154 799**********.99*99985543322333443323445******.7788899*****************85555555444999 PP NAM 84 katgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 ++tgk+k+v++ +g ++g kk++v+y+ + k+ k++Wvmh+y+l PKA66155.1 155 HKTGKTKPVMD-NGFQKGWKKIMVLYRSsrKGCKPDKANWVMHQYHL 200 *********.999*******6422555777*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MVYRAWLINS RGIAKKVKNA STDSNYQIRD LGGEAHRECP NCKYVIDNSD VSVEWPGLPA 60 GVKFDPSDAE LLEHLNGKVG MGNAKAHILI DEFIPTLEGD QGICYTHPKN LPGIKKDGSS 120 VHFFHRTSNA YSTGHRKRRK IHNQCSEFDD SVRWHKTGKT KPVMDNGFQK GWKKIMVLYR 180 SSRKGCKPDK ANWVMHQYHL GKDEDEKDGE MVVSKIFYQQ TKQMSTGETG LMPEGLNSLA 240 VRIDPRTPKT VTPRPPRSKL NASFEADEHS PLLLPVQDTR SSLPIVNLKA EDIGSTWWAG 300 ESQAVDEPET QKMDELLLCH EVLDLFPSIA ESSLPQFIFE SKDRSQQDDC TACGFSSLSN 360 IEVDTPPDFQ LSVRCLVLLS SPQSIFENVK FLISHYSKA

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MVYRAWLINS RGIAKKVKNA STDSNYQIRD LGGEAHRECP NCKYVIDNSD VSVEWPGLPA  60
GVKFDPSDAE LLEHLNGKVG MGNAKAHILI DEFIPTLEGD QGICYTHPKN LPGIKKDGSS  120
VHFFHRTSNA YSTGHRKRRK IHNQCSEFDD SVRWHKTGKT KPVMDNGFQK GWKKIMVLYR  180
SSRKGCKPDK ANWVMHQYHL GKDEDEKDGE MVVSKIFYQQ TKQMSTGETG LMPEGLNSLA  240
VRIDPRTPKT VTPRPPRSKL NASFEADEHS PLLLPVQDTR SSLPIVNLKA EDIGSTWWAG  300
ESQAVDEPET QKMDELLLCH EVLDLFPSIA ESSLPQFIFE SKDRSQQDDC TACGFSSLSN  360
IEVDTPPDFQ LSVRCLVLLS SPQSIFENVK FLISHYSKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	5e-92	NAC family protein