PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66240.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

HSF

Protein Properties

Length: 491aa MW: 53919.2 Da PI: 4.7251

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.9	4.3e-35	36	128	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d++++ ++sw +nsfvv++ ef++++Lpk+Fkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++i+ PKA66240.1 36 FLSKTYDMVDDPATDVIVSWGPGNNSFVVWNVPEFSRDLLPKHFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKNIN 123 9*******************99*************************************999.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k + PKA66240.1 124 RRKPS 128 975 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MDGESGGGGT GGGVTVAASS ASSVSATLNG SAPPPFLSKT YDMVDDPATD VIVSWGPGNN 60 SFVVWNVPEF SRDLLPKHFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG FLRGQKHLLK 120 NINRRKPSHA HSQHSTLPPV APNNVGACVE VGKFGLDEEI ERLKRDKNVL MQELVRLRQQ 180 QQATDHQLQT LTQRLQGMEQ RQQQMMSFLA KAMQSPSFLA QLVQQNDHNR RIVEVSKKRR 240 LPKQENKLEG DVGSSPDGQI IKYQPLMTEA AKAMLMQILK FDSPRLESLG HEDFFMENFP 300 PAHLSDSLSR NSGVTLKEVP SSSGFPSIQS SPTGASIPTS EISDVGLLPV VPEPMSSSST 360 SLDASEFTTI PGVIPNDGSF NVPVNDSQNP FLNPVAGAVD GPVPIEADKF SFDSEIDIPI 420 DDDSKLPCIN DSFWEQFLVE SPLPSDVTED LDSSIQDSKD MHPESGNVWD SAQNMKNLTE 480 QMGLLSSEAN K

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MDGESGGGGT GGGVTVAASS ASSVSATLNG SAPPPFLSKT YDMVDDPATD VIVSWGPGNN  60
SFVVWNVPEF SRDLLPKHFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG FLRGQKHLLK  120
NINRRKPSHA HSQHSTLPPV APNNVGACVE VGKFGLDEEI ERLKRDKNVL MQELVRLRQQ  180
QQATDHQLQT LTQRLQGMEQ RQQQMMSFLA KAMQSPSFLA QLVQQNDHNR RIVEVSKKRR  240
LPKQENKLEG DVGSSPDGQI IKYQPLMTEA AKAMLMQILK FDSPRLESLG HEDFFMENFP  300
PAHLSDSLSR NSGVTLKEVP SSSGFPSIQS SPTGASIPTS EISDVGLLPV VPEPMSSSST  360
SLDASEFTTI PGVIPNDGSF NVPVNDSQNP FLNPVAGAVD GPVPIEADKF SFDSEIDIPI  420
DDDSKLPCIN DSFWEQFLVE SPLPSDVTED LDSSIQDSKD MHPESGNVWD SAQNMKNLTE  480
QMGLLSSEAN K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-110	HSF family protein