PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66270.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family LSD
Protein Properties Length: 66aa    MW: 6742.83 Da    PI: 7.8108
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66270.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD141.22.8e-132852125
     zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                C+gCr+lL YP+GA+sV+Ca+C  V
  PKA66270.1 28 CSGCRNLLLYPLGATSVCCAICSVV 52
                **********************887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 66 aa     Download sequence    
MPVPLAPYPS PTVPFTPPQN GGQSQLVCSG CRNLLLYPLG ATSVCCAICS VVTTVPAPGN  60
EQKPSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32540.13e-18LSD family protein