PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66281.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family HB-other
Protein Properties Length: 233aa    MW: 26573.5 Da    PI: 6.5089
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66281.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.21.6e-0925621954
                HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
                Fe   ++yps  ++  LA+++gL+ +qV++WF N R +
  PKA66281.1 25 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 62
                664459******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MESHPWRPQR GLPERSVSIL RSWLFEHFLH PYPSDVDKHI LARQTGLSRS QVSNWFINAR  60
VRLWKPMVEE MYLEEQKEEE EKRKSQMTSQ ATTHREGGRG QSISNPNPNS NLNPSSSHPL  120
FEDQKPEPSR CHLHIDHDPH SLSSIITGMN SHHHNPNLNQ SFGILDGDFA AYRGHELTLG  180
LQQHERPLVF SREPIGVGDD GSDAVQFSMI EGEGQNIPYR NLMGAQLLHD LAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.12e-51TALE family protein