PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66303.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 356aa MW: 41259.2 Da PI: 6.5607

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.9	9.6e-54	35	164	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv++yL++kv+++k+ +vik+vd+yk+eP+dL+ k+ +ee+ ewyfFs++dkky+tg r+nratk+g+Wkatg+dk+++ k PKA66303.1 35 VPPGFRFHPTDEELVDYYLRRKVASTKIAH-NVIKDVDLYKIEPSDLQDicKIGEEEQhEWYFFSHKDKKYPTGARTNRATKTGFWKATGRDKPIYI-K 131 69***********************998.99**********943455444445**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 ++l+gl+ktLvfy+grap+g+k+dW+mheyrle PKA66303.1 132 HNLIGLRKTLVFYRGRAPNGQKSDWIMHEYRLE 164 99***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MQVVCGPLAM KTMYRVNEIL KLFENQQIMD QITQVPPGFR FHPTDEELVD YYLRRKVAST 60 KIAHNVIKDV DLYKIEPSDL QDICKIGEEE QHEWYFFSHK DKKYPTGART NRATKTGFWK 120 ATGRDKPIYI KHNLIGLRKT LVFYRGRAPN GQKSDWIMHE YRLESDENNW SSQEEGWVVC 180 RAFKKRAFSM NKAGSIHLQS PSWYDEYISS MPSLRESHHL INNINGHHIQ YSYDQENLAH 240 KYDHDQLPLE PDHDLQPPHS DQNPLVVESI KPAAGTLNNP EDSTAVLQEE RSSNFLIIHA 300 KSKGQTADQM TDWRILDKFV ASQLSQDGIS KDLSIFSNSV QDHDVPRSTA MGREED

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MQVVCGPLAM KTMYRVNEIL KLFENQQIMD QITQVPPGFR FHPTDEELVD YYLRRKVAST  60
KIAHNVIKDV DLYKIEPSDL QDICKIGEEE QHEWYFFSHK DKKYPTGART NRATKTGFWK  120
ATGRDKPIYI KHNLIGLRKT LVFYRGRAPN GQKSDWIMHE YRLESDENNW SSQEEGWVVC  180
RAFKKRAFSM NKAGSIHLQS PSWYDEYISS MPSLRESHHL INNINGHHIQ YSYDQENLAH  240
KYDHDQLPLE PDHDLQPPHS DQNPLVVESI KPAAGTLNNP EDSTAVLQEE RSSNFLIIHA  300
KSKGQTADQM TDWRILDKFV ASQLSQDGIS KDLSIFSNSV QDHDVPRSTA MGREED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-106	NAC family protein