PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66324.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family HD-ZIP
Protein Properties Length: 234aa    MW: 25838.7 Da    PI: 4.9142
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.23.7e-2063115456
                 -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++f++eq++ Le++Fe++ ++  +++++LA++lgL+ rqV +WFqN+Ra++k
  PKA66324.1  63 KRRFSDEQVRSLETMFEEQAKLEPRKKQQLAAELGLQPRQVAIWFQNKRARWK 115
                 458*************************************************9 PP
2HD-ZIP_I/II121.44.7e-3961153193
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  e+krr+s+eqv++LE++Fee+ kLep++K++la eLglqprqva+WFqn+RAR+k+kqlE+ y+aL++ yd+l+++ e+L ++++ L+ee+++
   PKA66324.1  61 ERKRRFSDEQVRSLETMFEEQAKLEPRKKQQLAAELGLQPRQVAIWFQNKRARWKAKQLERSYAALRADYDSLRADFESLLHQKDVLAEEVRR 153
                  69**************************************************************************************99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MPLINGGPPP TQPSPSPPPL ISPSHLPCPK DFVLPKTQTP NSSPMTTESF IWEATMAAVA  60
ERKRRFSDEQ VRSLETMFEE QAKLEPRKKQ QLAAELGLQP RQVAIWFQNK RARWKAKQLE  120
RSYAALRADY DSLRADFESL LHQKDVLAEE VRRLAEELGR DQSPEEGGGG SVEIAAPAAA  180
SPSSNATDSG EEVKNENGPS GSENQRFQGG NWPAEHISAG GGGSQWWEFL SYEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.17e-36HD-ZIP family protein