PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66568.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 420aa MW: 44822.6 Da PI: 8.8644

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.3	1e-30	193	251	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+a+d +++++tYeg+Hnh+ PKA66568.1 193 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCADDRTILITTYEGKHNHP 251 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MGIDLPMRLS SPAADESRRV IDEMDFFSQE KTRQTEAHVP AGSLGIKKED LTINTGLNLL 60 SGADQSTVDD GQSVADHEND DEKGEMQIAV MKAKIEQMEE ENQRLKSSLA QMNRNYHSLQ 120 MQLMAMMQPT KRRNRREGRG RGLTAREESP EGRWSPSRAA KPSPPKSPEH AQEATMRKAR 180 VSVRARSEAS MITDGCQWRK YGQKMAKGNP CPRAYYRCTM AAGCPVRKQV QRCADDRTIL 240 ITTYEGKHNH PLPPAAMAMA STTSAAASML LSGSMPSADG LINPNFLARA VLPCTSSLAT 300 ISASAPFPTV TLDLTHNPNP LQFQKPPAQF QIPQIFGQSL CSQSRFSGLQ LPVGTGGEQK 360 QQSLADTVSA ATAAITADPN FTAALAAAIT SIIAGGNGAG GAQQAGSHGG GSGDAKLGSG

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MGIDLPMRLS SPAADESRRV IDEMDFFSQE KTRQTEAHVP AGSLGIKKED LTINTGLNLL  60
SGADQSTVDD GQSVADHEND DEKGEMQIAV MKAKIEQMEE ENQRLKSSLA QMNRNYHSLQ  120
MQLMAMMQPT KRRNRREGRG RGLTAREESP EGRWSPSRAA KPSPPKSPEH AQEATMRKAR  180
VSVRARSEAS MITDGCQWRK YGQKMAKGNP CPRAYYRCTM AAGCPVRKQV QRCADDRTIL  240
ITTYEGKHNH PLPPAAMAMA STTSAAASML LSGSMPSADG LINPNFLARA VLPCTSSLAT  300
ISASAPFPTV TLDLTHNPNP LQFQKPPAQF QIPQIFGQSL CSQSRFSGLQ LPVGTGGEQK  360
QQSLADTVSA ATAAITADPN FTAALAAAIT SIIAGGNGAG GAQQAGSHGG GSGDAKLGSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	2e-81	WRKY family protein