PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66598.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NF-YB

Protein Properties

Length: 194aa MW: 21104.2 Da PI: 5.7214

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	163.1	3.8e-51	20	115	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 ++ drflPianvsrimk+ lP+nak+sk+aketvqecvsefisf+t+easdkc+rekrktingddllwa+ tlGf+ yv plk yl++ r ege+ PKA66598.1 20 KDPDRFLPIANVSRIMKRSLPSNAKVSKEAKETVQECVSEFISFITGEASDKCRREKRKTINGDDLLWAMETLGFDSYVVPLKSYLNRCRASEGER 115 688*****************************************************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MEGRRKGTPP DNETGSPAAK DPDRFLPIAN VSRIMKRSLP SNAKVSKEAK ETVQECVSEF 60 ISFITGEASD KCRREKRKTI NGDDLLWAME TLGFDSYVVP LKSYLNRCRA SEGERNFAAR 120 QQLHDGSEDC DDDQTSPSEE GDAADGQDGG FFPAAAARGF SGRMGGGVHE NSVHGRGSAP 180 FSSHRPTNFN SCLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	6e-56	NF-YB family protein