PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66629.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TCP

Protein Properties

Length: 342aa MW: 36055.9 Da PI: 7.912

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	133	2.7e-41	67	205	2	137
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..kaaksaaks 97 +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s+g ++ +saa++ PKA66629.1 67 LPKRTSSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSISAGpsHHLRSAASG 165 5799*****************************************************************999767777777774444455444444444 PP TCP 98 kksqksaasalnlak.esrakararare.rtrekmriknkln 137 + ++++ ln+++ ++ +a + r+ r++++m+ ++++ PKA66629.1 166 HYLSSPTI--LNFQEsSTDIDAAGNIRKrRWEQDMSHHQQQQ 205 44444444..66666333445555555546666666665554 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MMESEAGGGG GGSGPRRPNF PLQLLEKKEE ESIRCSTSSG YTGSDAAGPS HHQHHLSAAA 60 EQPKKALPKR TSSKDRHTKV DGRGRRIRMP ALCAARVFQL TRELGHKSDG ETIEWLLQQA 120 EPAVIAATGT GTIPANFTSL NISLRSSGSS ISAGPSHHLR SAASGHYLSS PTILNFQESS 180 TDIDAAGNIR KRRWEQDMSH HQQQQQEHMA AYCSATHGQI PANVWMAAGG AGDGVSGEPS 240 WPFAQMGAAA MFRGSMSSGL HFMNFPAPPM ALLPGQHNIG LGSAGGGGGG EGHLGLLTAL 300 NSYRPVAAAH DHPLAHAHLQ QQHQHQSGGQ SERNDAMSSS DS

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MMESEAGGGG GGSGPRRPNF PLQLLEKKEE ESIRCSTSSG YTGSDAAGPS HHQHHLSAAA  60
EQPKKALPKR TSSKDRHTKV DGRGRRIRMP ALCAARVFQL TRELGHKSDG ETIEWLLQQA  120
EPAVIAATGT GTIPANFTSL NISLRSSGSS ISAGPSHHLR SAASGHYLSS PTILNFQESS  180
TDIDAAGNIR KRRWEQDMSH HQQQQQEHMA AYCSATHGQI PANVWMAAGG AGDGVSGEPS  240
WPFAQMGAAA MFRGSMSSGL HFMNFPAPPM ALLPGQHNIG LGSAGGGGGG EGHLGLLTAL  300
NSYRPVAAAH DHPLAHAHLQ QQHQHQSGGQ SERNDAMSSS DS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	4e-49	TCP family protein