PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66650.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Dof

Protein Properties

Length: 359aa MW: 39879.2 Da PI: 8.3927

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66650.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.8	2.7e-39	95	154	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++++l+cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrk+k+s PKA66650.1 95 PDRILPCPRCNSMETKFCYFNNYNVNQPRHFCKNCQRYWTAGGSMRNVPVGAGRRKSKSS 154 68899****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MSENREPAIK LFGKRIRLPF EGEAPMAAGD GGGGNDEKAS SNEEANHRAE KARSPHEEVE 60 NEPAIFTEEE GKEPKYDEQQ KESGRNQQAK PLKKPDRILP CPRCNSMETK FCYFNNYNVN 120 QPRHFCKNCQ RYWTAGGSMR NVPVGAGRRK SKSSALNHHY RHINLPNATV LNFGSDPPLS 180 ESVASVLNLA EKATKNRTRN GTHPAENGEE QSSRSSMVTG SNSSEEANEE ARSNSQGFHN 240 FNGIPWPYSW SHPLPFCSSS FPVPFYPLAA YWGIPCLSPP PSSSPTLGKH SREEKSFWVP 300 KTLRIDSPEK AAKCSLWAAL GFKNDKAEFL SNSELKAHSQ VLQANPAALS RSLNFQESS

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MSENREPAIK LFGKRIRLPF EGEAPMAAGD GGGGNDEKAS SNEEANHRAE KARSPHEEVE  60
NEPAIFTEEE GKEPKYDEQQ KESGRNQQAK PLKKPDRILP CPRCNSMETK FCYFNNYNVN  120
QPRHFCKNCQ RYWTAGGSMR NVPVGAGRRK SKSSALNHHY RHINLPNATV LNFGSDPPLS  180
ESVASVLNLA EKATKNRTRN GTHPAENGEE QSSRSSMVTG SNSSEEANEE ARSNSQGFHN  240
FNGIPWPYSW SHPLPFCSSS FPVPFYPLAA YWGIPCLSPP PSSSPTLGKH SREEKSFWVP  300
KTLRIDSPEK AAKCSLWAAL GFKNDKAEFL SNSELKAHSQ VLQANPAALS RSLNFQESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	2e-76	Dof family protein