PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66657.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB
Protein Properties Length: 307aa    MW: 33350.3 Da    PI: 8.4965
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.18.5e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+  v+++G g+W++ +++ g+ R++k+c++rw +yl
       PKA66657.1 14 KGPWTPEEDQKLLAFVELHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding52.31.3e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l
       PKA66657.1  67 RGKFSMQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MGRSPCCDKD GLKKGPWTPE EDQKLLAFVE LHGHGSWRAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SMQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLANMG  120
IDPVTHKPKA DALASAGGRQ NKAANLSHMA QWESARLEAE ARLAREAKIR GSAPPSSSST  180
SLGTPPRAAA PCLDVLRALE SPTSTLSFSF ASSEVTNNCS WQQLAAESSI NGSLAVGFTG  240
MTLIGNTERR SSPERCGDSE NVAGGSGVEV EEDDGGTHEG EENRNYWSSI LNLVNSSSPP  300
NSSSPVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.18e-96MYB family protein