PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66739.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

DBB

Protein Properties

Length: 201aa MW: 21502.3 Da PI: 5.5691

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.7	1.8e-06	4	46	5	41
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ +e+ e+ C ++ lC C ++ H H++vp PKA66739.1 4 QCDVCERAEAVVLCCADEAALCWGCDEKVHAAnklagkHQRVP 46 7*****************************6688999999987 PP
2	zf-B_box	31.5	3.7e-10	57	100	1	38
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 s++++C+ +++k +fC +++ lC++C +++H H+ PKA66739.1 57 SKMPICDICQDKVGYFFCLEDRAVLCRSCDVAIHAAtpavsnHQ 100 5799******************************6566666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MKVQCDVCER AEAVVLCCAD EAALCWGCDE KVHAANKLAG KHQRVPFLLP TAAPAASKMP 60 ICDICQDKVG YFFCLEDRAV LCRSCDVAIH AATPAVSNHQ RFLITGVRVS LQHYLGSNCR 120 RGGRATTAAI NSSNSSGSVG NSNNPPSSME ANSFDRNKEL LSEAGIVVED VGFGLQWPWS 180 EVLENAELDC CHGLSEPGSS T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-53	DBB family protein