PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66793.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

ZF-HD

Protein Properties

Length: 219aa MW: 24346.7 Da PI: 8.4094

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	84.3	1.3e-26	18	68	3	58
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 + rY+eC++NhAa++Gg+a+DGC+Efm+ + +alkCaACgCHRnFHRre + PKA66793.1 18 GGRYRECMRNHAAAMGGQAYDGCCEFMAG-----EEEALKCAACGCHRNFHRREGS 68 569***********************7.....4589*************965 PP
2	Homeobox	14.5	5.9e-05	133	190	1	54
TT--SS--HHHHHHHHHHHH.....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFe.....knrypsaeereeLAkklgLterqVkvWFqNrRak 54 +r Rt+ft+eq e + e F+ + ++ + e+ e ++g++ + kvW +N+++k PKA66793.1 133 KRYRTKFTSEQREKMRE-FAdklgwRIQKHDDEALDEFCVEIGVKRHVLKVWMHNHKTK 190 799*********976.554776667888999999999999*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MDLSLVPYVE PAPAERCGGR YRECMRNHAA AMGGQAYDGC CEFMAGEEEA LKCAACGCHR 60 NFHRREGSPS RHQLVLYDRK HSVLPAPAPV AFFPPSLPFH QIPPTAAPLA AGDSARGGSE 120 TPPRREELGA TRKRYRTKFT SEQREKMREF ADKLGWRIQK HDDEALDEFC VEIGVKRHVL 180 KVWMHNHKTK IPVPSADFSS SASAAVDREA APPAPTIRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24660.1	8e-49	ZF-HD family protein