PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66823.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 188aa    MW: 21109.8 Da    PI: 10.2659
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66823.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM101.61.1e-31310232128
         NAM  32 evikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmhe 125
                 ++i+ vd +++ePw+Lp+     +v +++++++fF+++++++a+g r++r+t++gyWkatg+ + v++ +++ vg++kt+vfy+grap g+kt+Wvm+e
  PKA66823.1   3 RAIPVVDFFSHEPWQLPQlsgelCV-QGSDQCFFFAPQQEREAQGGRAKRTTAAGYWKATGSPTIVFD-GTRRVGVRKTMVFYEGRAPMGKKTNWVMNE 99 
                 57999************65676433.356799*******************************99999.999*************************** PP

         NAM 126 yrl 128
                 yrl
  PKA66823.1 100 YRL 102
                 *97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MERAIPVVDF FSHEPWQLPQ LSGELCVQGS DQCFFFAPQQ EREAQGGRAK RTTAAGYWKA  60
TGSPTIVFDG TRRVGVRKTM VFYEGRAPMG KKTNWVMNEY RLFEDTAGFS AGDHATDSFL  120
ICRLKMQIRA EFSLCRLYVR SSSLRSFDRR PPPEAGEAGT SRRQEAAPPA ASGKRRRSPT  180
ESFGQSRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44350.22e-48NAC family protein