PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66902.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

MYB

Protein Properties

Length: 239aa MW: 26620.9 Da PI: 6.6815

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.1	3.7e-17	19	64	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd ll d v++lG+++W++I++ ++ gR++k+c++rw + PKA66902.1 19 KGSWSQEEDALLRDSVERLGPRNWTLISAGIP-GRSGKSCRLRWCNQ 64 799***************************.*********985 PP
2	Myb_DNA-binding	58.7	1.3e-18	73	115	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Edel+v a++++G++ W+tIar ++ gRt++ +k++w++ PKA66902.1 73 PFTPGEDELIVSAHQKHGNK-WATIARLLP-GRTDNAIKNHWNST 115 69****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MDRDSAERME RGEVEEKIKG SWSQEEDALL RDSVERLGPR NWTLISAGIP GRSGKSCRLR 60 WCNQLSPVVQ HIPFTPGEDE LIVSAHQKHG NKWATIARLL PGRTDNAIKN HWNSTLRRRH 120 RSESSASASA ASGPEDSETE SGKRQCRREV DLNLTRPPTP EAADLLTSLS LSLPGERSAA 180 AAIGVERRRE GEINRACMMS IMREMIAEEV RRYMDLLVAE GGSVLPIVVK EESASNEQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	8e-51	MYB family protein