PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66931.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 160aa    MW: 18179.8 Da    PI: 9.9208
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66931.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.93.7e-162367147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r+rW+ eE+e+++da  ++G + Wk+I   +g ++t  q++s+ qky
       PKA66931.1 23 RDRWSDEEHERFLDALLLFGRE-WKKIEDFVG-TKTVIQIRSHAQKY 67
                     89******************99.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MLSMDADGSS KKLRKPYTIT KSRDRWSDEE HERFLDALLL FGREWKKIED FVGTKTVIQI  60
RSHAQKYFLK VQKNGMMAHV PPPRPKRNAT HSYPKKPLID DLAPLQLQSS MVFPSTSTGL  120
ILSSSAWDDP SMSRDYSSND AMSSSSYYNA IHGVEGKILL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.22e-57MYB_related family protein