PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66959.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

MYB

Protein Properties

Length: 263aa MW: 29813.2 Da PI: 9.4425

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.1	1.3e-15	45	90	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v +G+ +W++Ia+++ gR++k+c++rw++ PKA66959.1 45 RGHWRPAEDAKLRELVSGHGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 90 899***************************.*********996 PP
2	Myb_DNA-binding	56.5	6.3e-18	97	140	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++++eE+e+l+ a++++G++ W++I+r ++ gRt++ +k++w+ PKA66959.1 97 KKAFSEEEEERLLSAHRLYGNK-WALISRLFP-GRTDNAVKNHWHV 140 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MGFSPAAPLP PLFPSVERDR RSNGSEKEAD ETIVKGGGRS KLCARGHWRP AEDAKLRELV 60 SGHGPQNWNL IAEKLEGRSG KSCRLRWFNQ LDPRINKKAF SEEEEERLLS AHRLYGNKWA 120 LISRLFPGRT DNAVKNHWHV IMARRQREHS NLYHERKTPS NSISQPSSKT FSSCESSLSR 180 NRDELYQLDY LFGSHERLFY CGNGFHNGPP PLFQSVCSDS NSEASVTESA VSQRGRGYHH 240 EERGHERAKI GLPFIDFLGV GAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26780.2	6e-72	MYB family protein