PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA66966.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 275aa MW: 31332.1 Da PI: 6.8007

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA66966.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.2	1.1e-51	13	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtd+elvv+yL+kkv+++++++ +i+ev++yk++PwdLp k+ ++kewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v + + + PKA66966.1 13 LPPGFRFHPTDDELVVHYLCKKVSQQRIPV-PIIAEVNLYKYNPWDLPDKALFGTKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPSgNFR 110 79**************************.88***********7777899**********************************975667 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy+g+ap+g+ktdW+mheyrl PKA66966.1 111 PLGIKKALVFYDGKAPRGVKTDWIMHEYRL 140 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MGRTRDAESE LNLPPGFRFH PTDDELVVHY LCKKVSQQRI PVPIIAEVNL YKYNPWDLPD 60 KALFGTKEWY FFTPRDRKYP NGSRPNRAAG RGYWKATGAD KPVAPSGNFR PLGIKKALVF 120 YDGKAPRGVK TDWIMHEYRL ADGSRSSKRS GSLRLDDWVL CRLYNKKNNW GKSQPEMTDS 180 TEGNEDTGSS ESLRTPESDI ELPDFDELGL PVTYKNQETG RRELPVMAAI KEDYDWYSEL 240 NLEDLQNPFG AAVGVSNQDY FFSSFARPIG NSPAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	2e-78	NAC family protein