PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA66979.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 231aa    MW: 25831.7 Da    PI: 9.4796
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA66979.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.94.3e-2385146259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59 
                 +Dg++WrKYGqK++++s +prsYYrCt++   gC + k+v++ + +d + ++++Y++eH+++
  PKA66979.1  85 HDGHQWRKYGQKNIQNSIHPRSYYRCTYKdgqGCLASKQVQQIDgDDSSRFIVVYSNEHTCR 146
                 7***************************99999********9872567889*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MRAHGAASVS STAISLRGRP PVEGRRRALG QRAAVVDFGA DRSQPRRQRL REAQAHGSCK  60
EKLKEMAARR KEMRTWRTIT SAPYHDGHQW RKYGQKNIQN SIHPRSYYRC TYKDGQGCLA  120
SKQVQQIDGD DSSRFIVVYS NEHTCRSRPP AWARVEHFDV GDEQSQMLRF GERTKEAAVA  180
PACFSGGGEA VPSSSSSSSD QHDHVRAAIN GDERACYLDE FAFGECSSLN L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40750.12e-19WRKY family protein