PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA67023.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YC
Protein Properties Length: 170aa    MW: 19481.1 Da    PI: 5.2516
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA67023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC174.41.2e-54421451101
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 ql++fw++q   ie++tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt rsw haeenkrrtl+k+diaaa+trtd+fdflvdiv
  PKA67023.1  42 QLQMFWADQyreIEQTTDFKNHSLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRSWAHAEENKRRTLQKNDIAAAITRTDVFDFLVDIV 140
                 89*****99999*************************************************************************************** PP

       NF-YC  97 prdel 101
                 pr+e 
  PKA67023.1 141 PREEG 145
                 **985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MDQQGQASQP VMGVAAPVPY VAGAGAPFQA YQHLYQQQQQ QQLQMFWADQ YREIEQTTDF  60
KNHSLPLARI KKIMKADEDV RMIAAEAPVV FARACEMFIL ELTHRSWAHA EENKRRTLQK  120
NDIAAAITRT DVFDFLVDIV PREEGKEDIS LPRSLPGQPN DPLSYYYVQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115121RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.13e-64NF-YC family protein