PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA67119.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 504aa MW: 54582.1 Da PI: 7.1427

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA67119.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.2	3e-32	178	234	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkver+ +++++ei+Y+g+Hnh PKA67119.1 178 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERNI-EGQITEIVYKGTHNHL 234 8**************************************.*************5 PP
2	WRKY	105.4	3e-33	349	407	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+agCpv+k+ver+++d + v++tYeg+Hnh+ PKA67119.1 349 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASHDLRSVITTYEGKHNHD 407 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MASSTGSIEA SSAAFSFSSP YATSFSELLA GAGDEGDSGQ SKGFGDRGGG GGGIPKFKSI 60 PPPYLPISPP AFSPSSYFAI PAGLSPAELL DSPVLLSSNS ILQSPTTGSF PAQAFNGKTN 120 TGHKEENKAY SDFSFPIQPQ PSSFQQQPWS YQQLNIKTEL SVPSSSEIQS TKELRKSDDG 180 YNWRKYGQKQ VKGSENPRSY YKCTYPNCPT KKKVERNIEG QITEIVYKGT HNHLKPQSTR 240 RNSSSSQSLP AAVLVQSEAS ELSHGGRSGT PMESVATPDN SSVSFGDDDV DLSSQRSNPA 300 GDELDDDEPE AKRWRQEAEN EGVSAAAASN KTVREPRVVV QTTSDIDILD DGYRWRKYGQ 360 KVVKGNPNPR SYYKCTTAGC PVRKHVERAS HDLRSVITTY EGKHNHDVPA ARGSGGHRLP 420 PAENGHGATK AIRPAAIAGS SNLMAANSLF GQRLEINHIY IWDDDENHLR GVLLRDEALE 480 SNVRGGICQR DKSSQDVAEK LRPV

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MASSTGSIEA SSAAFSFSSP YATSFSELLA GAGDEGDSGQ SKGFGDRGGG GGGIPKFKSI  60
PPPYLPISPP AFSPSSYFAI PAGLSPAELL DSPVLLSSNS ILQSPTTGSF PAQAFNGKTN  120
TGHKEENKAY SDFSFPIQPQ PSSFQQQPWS YQQLNIKTEL SVPSSSEIQS TKELRKSDDG  180
YNWRKYGQKQ VKGSENPRSY YKCTYPNCPT KKKVERNIEG QITEIVYKGT HNHLKPQSTR  240
RNSSSSQSLP AAVLVQSEAS ELSHGGRSGT PMESVATPDN SSVSFGDDDV DLSSQRSNPA  300
GDELDDDEPE AKRWRQEAEN EGVSAAAASN KTVREPRVVV QTTSDIDILD DGYRWRKYGQ  360
KVVKGNPNPR SYYKCTTAGC PVRKHVERAS HDLRSVITTY EGKHNHDVPA ARGSGGHRLP  420
PAENGHGATK AIRPAAIAGS SNLMAANSLF GQRLEINHIY IWDDDENHLR GVLLRDEALE  480
SNVRGGICQR DKSSQDVAEK LRPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-108	WRKY family protein