PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA67180.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YB
Protein Properties Length: 163aa    MW: 18440.8 Da    PI: 9.0572
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA67180.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB39.61.3e-12631273195
       NF-YB  31 aketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                 a     e    fi ++++ a+d c++ kr+tin++d++ al ++ f ++++pl++ l+++r  ++
  PKA67180.1  63 ALLAFSESTRIFIHYLSATANDICKESKRQTINAEDVFKALDEMEFPEFIQPLRASLQEFRRKNT 127
                 55566778888*************************************************98665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MVKGDASDGT TVAPATQAMV EELPRTIVRR VVKEKLSHLS SSSRKKSKSD DGGNEEMILH  60
RDALLAFSES TRIFIHYLSA TANDICKESK RQTINAEDVF KALDEMEFPE FIQPLRASLQ  120
EFRRKNTMKK SGAKAKETKK RKSQDHLPAQ DEKDQESYHG ENS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123142RRKNTMKKSGAKAKETKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.12e-32NF-YB family protein