PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA67211.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C3H
Protein Properties Length: 148aa    MW: 16606.7 Da    PI: 8.94
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA67211.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.42.8e-096182526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                 C++f r G CkyGd+Ck+ H+
  PKA67211.1 61 VCHHFVRKGSCKYGDTCKYYHP 82
                6********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MPLGKYYCDY CDKQFQDTAA ARRRHLSGVQ HQRNRALWYD SLKDAHGVFL FQQDGNLDMG  60
VCHHFVRKGS CKYGDTCKYY HPTQNMAQRT PPVIGYPPNS FDNRLVGGST LPGNVAGDRF  120
GISRGNLPPS LRPPPDGGYP SLPFVDWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.15e-39C3H family protein