PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA67217.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Protein Properties

Length: 894aa MW: 98925.9 Da PI: 7.2803

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA67217.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.6	2.3e-18	361	460	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++lv++ PKA67217.1 361 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLKIQDAKGKEWHFQFRFwpNNNSRMYVLE-GVTPCIQSLQLQAGDTVTFSRID-PEGKLVMG 457 99************************555566778***********99899999999.*******************987.77777776 PP EE- CS B3 96 vfr 98 ++ PKA67217.1 458 YRK 460 665 PP

Sequence ? help Back to Top
Protein Sequence Length: 894 aa Download sequence
MSAKRCMNAS CGGAVAGEAN WRKGWLLKSG DNATLCDKCG LAYEQLAFCE NFHQNESGWR 60 ECAFCGKRLH CGCIASKPLL DLLDGGGVQC LSCSKTYGST FFPNDSVQDL LLQSSQNVYG 120 PSAWSYAEEE RYNFDISPAN ESSDVLTAIS GSYDENARCN ILHCGTEVNG YRILPLAKIE 180 NGNRSFGHVK SEQVALHMEE FGFPGCTDQE QSLPGLLQVS KRIDSNNALK DNFNLAKACL 240 SMTLGVQNMG NLMEDNSKAS TWKITSSQHC AVSDMREKNK SFSAFQHDLR DRHHRLPRLP 300 KGSFCAASDA PRELIAQVRI ARPPAEGRGR NQLLPRYWPR ITDQELQQIT GDSNSTIVPL 360 FEKVLSASDA GRIGRLVLPK ACAEAYFPPI SQPEGLPLKI QDAKGKEWHF QFRFWPNNNS 420 RMYVLEGVTP CIQSLQLQAG DTVTFSRIDP EGKLVMGYRK ATNNVQSLQD SQISAMANGF 480 PGCETVSPGV NENLSTTDKH GGLLNEGLLQ PLLIQEKRRS RNIGSRTKRL LMDTEDAMEL 540 KFTWLEAQDF LLPPPKVKPS IVIIEDQEFE EYEDPPVLAK RTFNTVQVSG GHDQWIQCDD 600 CFRWRRIPLG VLPPSKWACA DNTWDPKRSS CAAPDELTST ELHSLLRQHS EMKRKQITTI 660 SSQSLSDLEL TNLKALAGAA GLGETGSEAT TAAVTTRHPR HRPGCTCIVC IQPPSGKGPK 720 HSPSCSCNVC MTVKRRFKTL MMRKKKRQSE REDSEANKKL AWSSRDEIED MTSSLKTIQQ 780 NDPRIVGEFM KNLVINKAHI DLNCQPRRDA EQQAVGPSSP RASMMNLLQA ASRPLESYLK 840 QNKLASLTVS EQQVSSSSVT VHQAPIESES GGDEEHCGSD KIAGDAAAAA LLYE

Sequence ? help Back to Top

Protein Sequence Length: 894 aa Download sequence

MSAKRCMNAS CGGAVAGEAN WRKGWLLKSG DNATLCDKCG LAYEQLAFCE NFHQNESGWR  60
ECAFCGKRLH CGCIASKPLL DLLDGGGVQC LSCSKTYGST FFPNDSVQDL LLQSSQNVYG  120
PSAWSYAEEE RYNFDISPAN ESSDVLTAIS GSYDENARCN ILHCGTEVNG YRILPLAKIE  180
NGNRSFGHVK SEQVALHMEE FGFPGCTDQE QSLPGLLQVS KRIDSNNALK DNFNLAKACL  240
SMTLGVQNMG NLMEDNSKAS TWKITSSQHC AVSDMREKNK SFSAFQHDLR DRHHRLPRLP  300
KGSFCAASDA PRELIAQVRI ARPPAEGRGR NQLLPRYWPR ITDQELQQIT GDSNSTIVPL  360
FEKVLSASDA GRIGRLVLPK ACAEAYFPPI SQPEGLPLKI QDAKGKEWHF QFRFWPNNNS  420
RMYVLEGVTP CIQSLQLQAG DTVTFSRIDP EGKLVMGYRK ATNNVQSLQD SQISAMANGF  480
PGCETVSPGV NENLSTTDKH GGLLNEGLLQ PLLIQEKRRS RNIGSRTKRL LMDTEDAMEL  540
KFTWLEAQDF LLPPPKVKPS IVIIEDQEFE EYEDPPVLAK RTFNTVQVSG GHDQWIQCDD  600
CFRWRRIPLG VLPPSKWACA DNTWDPKRSS CAAPDELTST ELHSLLRQHS EMKRKQITTI  660
SSQSLSDLEL TNLKALAGAA GLGETGSEAT TAAVTTRHPR HRPGCTCIVC IQPPSGKGPK  720
HSPSCSCNVC MTVKRRFKTL MMRKKKRQSE REDSEANKKL AWSSRDEIED MTSSLKTIQQ  780
NDPRIVGEFM KNLVINKAHI DLNCQPRRDA EQQAVGPSSP RASMMNLLQA ASRPLESYLK  840
QNKLASLTVS EQQVSSSSVT VHQAPIESES GGDEEHCGSD KIAGDAAAAA LLYE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	734	745	KRRFKTLMMRKK
2	734	747	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein