PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNG99700.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family NF-YC
Protein Properties Length: 195aa    MW: 19995 Da    PI: 5.972
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNG99700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC765.3e-2414953101
       NF-YC  53 lfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101
                 +fileltlrsw+haeenkrrtl+++d+aaa+t+tdifdflvdivpr++ 
  PNG99700.1   1 MFILELTLRSWMHAEENKRRTLQRNDVAAAITKTDIFDFLVDIVPREDA 49 
                 8*********************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MFILELTLRS WMHAEENKRR TLQRNDVAAA ITKTDIFDFL VDIVPREDAK PEDGQATASM  60
PPPPPAALPS ASMGLGPRPQ GLPGHPALGP GGLFFQMPPG ALGGDPSQAA AAAAAMMRPP  120
MPPMGVDPAL MSMYQQQQLM TGQGWPHMAG LPPPVGLGSA AGAAAMAAQV QHHQMQAAAA  180
AAAAAAGQQG QPSAD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11925RRTLQRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63470.23e-26NF-YC family protein