PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

PNG99875.1

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

Protein Properties

Length: 319aa MW: 35781.6 Da PI: 8.7622

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNG99875.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00075	57	81	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C F + +L+rH r+H PNG99875.1 57 YACDhpGCEAAFAMSGDLTRHKRSH 81 789999******************9 PP
2	zf-C2H2	15.5	4.9e-05	87	111	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C Cg F + +L+rH rtH PNG99875.1 87 YACDyeGCGAAFAMRGDLTRHKRTH 111 789999******************9 PP
3	zf-C2H2	13.9	0.00016	117	141	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ Cg F+++ +L+ H ++H PNG99875.1 117 YACNyeSCGAAFTQSGHLTDHKSVH 141 889999****************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MLKSRGAFTK SSHLTKHKRT HTGEKPYACD YEGCCASFAE SGHLVNHKRT HTGKKPYACD 60 HPGCEAAFAM SGDLTRHKRS HTGEKLYACD YEGCGAAFAM RGDLTRHKRT HTGEKPYACN 120 YESCGAAFTQ SGHLTDHKSV HNPEGQARQK KQEQRVARAL DRAGIPYKRE HQIDFRCIGG 180 DAGFWARVDF VIVLHGRVIF LEVDEGQHKF GSYGSASCDM KRMSRIQESL FDGGNTLPLV 240 FLRYNPNVFR VDGKVVKKLK VMREAELVSL LENSTSDAFS CARPLVIQYM YYDVVGCHSV 300 TRDPEYHGHI AQCCARPIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.2	4e-19	C2H2 family protein