PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH00964.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

C2H2

Protein Properties

Length: 1185aa MW: 128566 Da PI: 8.376

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH00964.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.2	0.0012	75	99	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C F + +L+rH rtH PNH00964.1 75 YACDhpGCEAAFAKSGDLTRHKRTH 99 789999******************9 PP
2	zf-C2H2	12.3	0.00051	135	159	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C sF r+ +L++H rtH PNH00964.1 135 YACNhrGCEASFARSGSLVHHKRTH 159 889999******************9 PP
3	zf-C2H2	15.9	3.6e-05	195	219	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C C+ +F+++ nL++H rtH PNH00964.1 195 YTCDhpGCDAVFTQSGNLVHHKRTH 219 89999*******************9 PP
4	zf-C2H2	14.3	0.00012	285	309	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C Cg F+++ +L+ H rtH PNH00964.1 285 YACDyeSCGAAFTQSGHLTIHKRTH 309 7899999*****************9 PP
5	zf-C2H2	16.3	2.8e-05	315	339	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C Cg F+++ +L++H rtH PNH00964.1 315 YACDyeGCGAAFTTSGSLVKHKRTH 339 789999******************9 PP
6	zf-C2H2	12.7	0.0004	375	400	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y C+ Cg F+++ +L++H ++ H PNH00964.1 375 YACNydSCGAAFTQSGHLTNHKSSlH 400 889999***************99988 PP
7	zf-C2H2	11.2	0.0012	531	555	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C F + +L+rH rtH PNH00964.1 531 YACDhpGCEAAFAKSGDLTRHKRTH 555 789999******************9 PP
8	zf-C2H2	11.7	0.00081	561	585	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C F r+s+L H rtH PNH00964.1 561 YACDhpGCEAAFARSSSLALHKRTH 585 789999******************9 PP
9	zf-C2H2	11.2	0.0012	591	615	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C F + +L+rH rtH PNH00964.1 591 YACDhpGCEAAFAKSGDLTRHKRTH 615 789999******************9 PP
10	zf-C2H2	11.7	0.00081	621	645	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C F r+s+L H rtH PNH00964.1 621 YACDhpGCEAAFARSSSLALHKRTH 645 789999******************9 PP
11	zf-C2H2	12.3	0.00051	681	705	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C sF r+ +L++H rtH PNH00964.1 681 YACNhrGCEASFARSGSLVHHKRTH 705 889999******************9 PP
12	zf-C2H2	12.3	0.00051	741	765	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C sF r+ +L++H rtH PNH00964.1 741 YACNhrGCEASFARSGSLVHHKRTH 765 889999******************9 PP
13	zf-C2H2	15.9	3.6e-05	801	825	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C C+ +F+++ nL++H rtH PNH00964.1 801 YTCDhpGCDAVFTQSGNLVHHKRTH 825 89999*******************9 PP
14	zf-C2H2	11.9	0.00068	861	885	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C Cg F + +nL++H rtH PNH00964.1 861 YTCDypGCGAAFLTGDNLTTHKRTH 885 89**********************9 PP
15	zf-C2H2	14.8	8.4e-05	891	915	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ Cg F+++ +L+ H rtH PNH00964.1 891 YACNydSCGAAFTQSGHLTIHKRTH 915 889999******************9 PP
16	zf-C2H2	16.3	2.8e-05	921	945	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C Cg F+++ +L++H rtH PNH00964.1 921 YACDyeGCGAAFTTSGSLVKHKRTH 945 789999******************9 PP
17	zf-C2H2	11.9	0.00068	951	975	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C Cg F + +nL++H rtH PNH00964.1 951 YTCDypGCGAAFLTGDNLTTHKRTH 975 89**********************9 PP
18	zf-C2H2	12.7	0.0004	981	1006	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y C+ Cg F+++ +L++H ++ H PNH00964.1 981 YACNydSCGAAFTQSGHLTNHKSSlH 1006 889999***************99988 PP

Sequence ? help Back to Top
Protein Sequence Length: 1185 aa Download sequence
MNSPPRPLNA PKETDGPGRC NYKVTNARSG ILALHKRTHT GEKPYACDHP GCEAAFATSG 60 GLTTHKRTHT GEKPYACDHP GCEAAFAKSG DLTRHKRTHT GEKPYACDHP GCEAAFATSG 120 GLTTHKRTHT GEKPYACNHR GCEASFARSG SLVHHKRTHT GEKPYACDHP GCEAAFATSG 180 GLVTHKRTHT GEKPYTCDHP GCDAVFTQSG NLVHHKRTHT GEKPNACDHP GCEVAFATSG 240 GLVTHKRTHT GEKPYACDHP GCEAAFVTSG ELTTHKRTHT GEKPYACDYE SCGAAFTQSG 300 HLTIHKRTHT GEKPYACDYE GCGAAFTTSG SLVKHKRTHT GEKPYACDYP GCGAAFLTGD 360 NLTTHKRTHT GEKPYACNYD SCGAAFTQSG HLTNHKSSLH SPEGQARQKK QEQRVARALD 420 RAGIPYKREH QIDFRCIGGD AGFWARVDFV ILLHGRVIFL EVDEGQHKFG SYGSASCDMK 480 RMSRILESLA DGGNTLPLET DGPGRCNYKV TNARSGILAL HKRTHTGEKP YACDHPGCEA 540 AFAKSGDLTR HKRTHTGEKP YACDHPGCEA AFARSSSLAL HKRTHTGEKP YACDHPGCEA 600 AFAKSGDLTR HKRTHTGEKP YACDHPGCEA AFARSSSLAL HKRTHTGEKP YACDHPGCEA 660 AFATSGGLTT HKRTHTGEKP YACNHRGCEA SFARSGSLVH HKRTHTGEKP YACDHPGCEA 720 AFATSGGLVT HKRTHTGEKP YACNHRGCEA SFARSGSLVH HKRTHTGEKP YACDHPGCEA 780 AFATSGGLVT HKRTHTGEKP YTCDHPGCDA VFTQSGNLVH HKRTHTGEKP NACDHPGCEV 840 AFATSGGLVT HKRTHTGEKP YTCDYPGCGA AFLTGDNLTT HKRTHTGEKP YACNYDSCGA 900 AFTQSGHLTI HKRTHTGEKP YACDYEGCGA AFTTSGSLVK HKRTHTGEKP YTCDYPGCGA 960 AFLTGDNLTT HKRTHTGEKP YACNYDSCGA AFTQSGHLTN HKSSLHSPEG QARQKKQEQR 1020 VARALDRAGI PYKREHQIDF RCIGGDAGFW ARVDFVILLH GRVIFLEVDE GQHKFGSYGS 1080 ASCDMKRMSR ILESLADGGN TLPLVFLRYN PNVFTVNGKV VKKLKAAREA ELVSLLENPM 1140 SDALSCARPL VIQYMFYDVI GCHAVVTRDP EYTAHIAQCC TCPIV

Sequence ? help Back to Top

Protein Sequence Length: 1185 aa Download sequence

MNSPPRPLNA PKETDGPGRC NYKVTNARSG ILALHKRTHT GEKPYACDHP GCEAAFATSG  60
GLTTHKRTHT GEKPYACDHP GCEAAFAKSG DLTRHKRTHT GEKPYACDHP GCEAAFATSG  120
GLTTHKRTHT GEKPYACNHR GCEASFARSG SLVHHKRTHT GEKPYACDHP GCEAAFATSG  180
GLVTHKRTHT GEKPYTCDHP GCDAVFTQSG NLVHHKRTHT GEKPNACDHP GCEVAFATSG  240
GLVTHKRTHT GEKPYACDHP GCEAAFVTSG ELTTHKRTHT GEKPYACDYE SCGAAFTQSG  300
HLTIHKRTHT GEKPYACDYE GCGAAFTTSG SLVKHKRTHT GEKPYACDYP GCGAAFLTGD  360
NLTTHKRTHT GEKPYACNYD SCGAAFTQSG HLTNHKSSLH SPEGQARQKK QEQRVARALD  420
RAGIPYKREH QIDFRCIGGD AGFWARVDFV ILLHGRVIFL EVDEGQHKFG SYGSASCDMK  480
RMSRILESLA DGGNTLPLET DGPGRCNYKV TNARSGILAL HKRTHTGEKP YACDHPGCEA  540
AFAKSGDLTR HKRTHTGEKP YACDHPGCEA AFARSSSLAL HKRTHTGEKP YACDHPGCEA  600
AFAKSGDLTR HKRTHTGEKP YACDHPGCEA AFARSSSLAL HKRTHTGEKP YACDHPGCEA  660
AFATSGGLTT HKRTHTGEKP YACNHRGCEA SFARSGSLVH HKRTHTGEKP YACDHPGCEA  720
AFATSGGLVT HKRTHTGEKP YACNHRGCEA SFARSGSLVH HKRTHTGEKP YACDHPGCEA  780
AFATSGGLVT HKRTHTGEKP YTCDHPGCDA VFTQSGNLVH HKRTHTGEKP NACDHPGCEV  840
AFATSGGLVT HKRTHTGEKP YTCDYPGCGA AFLTGDNLTT HKRTHTGEKP YACNYDSCGA  900
AFTQSGHLTI HKRTHTGEKP YACDYEGCGA AFTTSGSLVK HKRTHTGEKP YTCDYPGCGA  960
AFLTGDNLTT HKRTHTGEKP YACNYDSCGA AFTQSGHLTN HKSSLHSPEG QARQKKQEQR  1020
VARALDRAGI PYKREHQIDF RCIGGDAGFW ARVDFVILLH GRVIFLEVDE GQHKFGSYGS  1080
ASCDMKRMSR ILESLADGGN TLPLVFLRYN PNVFTVNGKV VKKLKAAREA ELVSLLENPM  1140
SDALSCARPL VIQYMFYDVI GCHAVVTRDP EYTAHIAQCC TCPIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.2	3e-22	C2H2 family protein