PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH01079.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family C2H2
Protein Properties Length: 361aa    MW: 40857.5 Da    PI: 8.2206
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH01079.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.91.7e-05127151123
                 EEET..TTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCp..dCgksFsrksnLkrHirtH 23 
                 y C    C+  F r+ nL++H rtH
  PNH01079.1 127 YACDypGCDAAFARSGNLVHHKRTH 151
                 789999******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MRVDDFSALR HEYKCGFTAE DVPFTYPRYF GVQFAVAALT LGSNEDRHAI DIVRQPFNSV  60
YLFGHEDAIR SISIDGFEAP GWEAIRNIAL HWLRIQASAR RIQLWWRHKL VARRMALSGS  120
LHREKPYACD YPGCDAAFAR SGNLVHHKRT HTGEKPYACD YEGCGAAFAE SGNLAIHKSS  180
LHSPEGQARQ KKQEQRVARA LDRAGILYKR EHQIDFRCIG DHAGFWARVD FVIVLHGRVI  240
FLEVDEEQHK FGSYGSASCD MKRMSRILES LADGGNTLPL VFLRYNPNVF TVNGKVVKKL  300
KAARESELVS LLENPASEVF SCDRPIVIQY LYYDVVGCHA AVTRDPEYNA HIAQCCARPI  360
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06634.25e-10C2H2 family protein