PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH01421.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

bZIP

Protein Properties

Length: 449aa MW: 46562.8 Da PI: 5.3437

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH01421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.2	2.1e-14	210	270	3	63
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e++r+rr++kNR+ A rsR+RKka eLeek k e+eN++L+ l++ e ++lks++ PNH01421.1 210 ERRRQRRLAKNRVTAARSRERKKAAWSELEEKLKGVENENSQLRAMLQQFASENSSLKSQL 270 689*******************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MDVDAMDLAA ILGEPSGSLP DDLDYLIDDE LMQFLNDPEP AKACWQAPDS IPAPVVSSSS 60 VQSSRDTSDG GCAASPPSTT CGSSPPPVAP AIAPAAAAYA AFQLQMQPGA PCQGLDPRLI 120 TTTAAQQLWT AVLAAAQAAA PCSAPAVPVD EAKARGQPAG TSRQGSADCS ADSSGSDGDD 180 DGDDMDSKAR AGNKRKAPEV DWRQITDPSE RRRQRRLAKN RVTAARSRER KKAAWSELEE 240 KLKGVENENS QLRAMLQQFA SENSSLKSQL LNITRAGVAG SGAAGASQAR TGKARDPAKI 300 LPVIIAIMLL VLSLCPGDAP LLVLGSLLPV ALAASQLGGE AAEAGSALDS IFNLLHMLRT 360 LFAKSGRLLQ RSVNRLLFER HRYLGRSGMR KLACVPCDVL LRDRGEGLGG EPGAYAGGAA 420 VSAAVGASCA MAEASVPMAC VVVKQEPVC

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MDVDAMDLAA ILGEPSGSLP DDLDYLIDDE LMQFLNDPEP AKACWQAPDS IPAPVVSSSS  60
VQSSRDTSDG GCAASPPSTT CGSSPPPVAP AIAPAAAAYA AFQLQMQPGA PCQGLDPRLI  120
TTTAAQQLWT AVLAAAQAAA PCSAPAVPVD EAKARGQPAG TSRQGSADCS ADSSGSDGDD  180
DGDDMDSKAR AGNKRKAPEV DWRQITDPSE RRRQRRLAKN RVTAARSRER KKAAWSELEE  240
KLKGVENENS QLRAMLQQFA SENSSLKSQL LNITRAGVAG SGAAGASQAR TGKARDPAKI  300
LPVIIAIMLL VLSLCPGDAP LLVLGSLLPV ALAASQLGGE AAEAGSALDS IFNLLHMLRT  360
LFAKSGRLLQ RSVNRLLFER HRYLGRSGMR KLACVPCDVL LRDRGEGLGG EPGAYAGGAA  420
VSAAVGASCA MAEASVPMAC VVVKQEPVC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	216	RQITDPSERRRQRR
2	210	217	ERRRQRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11260.1	4e-09	bZIP family protein