PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

PNH01555.1

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

Protein Properties

Length: 302aa MW: 33301.7 Da PI: 7.6549

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH01555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	8	32	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C Cg F ++ +L++H rtH PNH01555.1 8 YACDykGCGAAFATSGDLVKHKRTH 32 789999******************9 PP
2	zf-C2H2	10.7	0.0016	38	62	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C dC F + L+ H rtH PNH01555.1 38 YACDypDCEAAFAESGALVYHKRTH 62 789999******************9 PP
3	zf-C2H2	12.5	0.00045	68	92	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C+ +F + L++H rtH PNH01555.1 68 YACDyeGCDAVFAKSGGLTTHKRTH 92 789999******************9 PP
4	zf-C2H2	14.8	8.4e-05	98	123	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y C Cg F+++ nL+ H ++ H PNH01555.1 98 YACDyeGCGAAFTTSGNLVIHKSSlH 123 789999***************99988 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MHTGEKPYAC DYKGCGAAFA TSGDLVKHKR THTGEKPYAC DYPDCEAAFA ESGALVYHKR 60 THTGEKPYAC DYEGCDAVFA KSGGLTTHKR THTGEKPYAC DYEGCGAAFT TSGNLVIHKS 120 SLHTQEGQAR QKKQEQRVAR ALDKAGIPYK REHQIDFRCI GGDAGFWARV DFVIVLHGRV 180 IFLEVDEGQH KFGSYGSASC DMKRMSRILE SLADGGNTLP LVFLRYNPNV FTVDGQVVKK 240 LKAAREAVLV SVLENPASEV FSCDRPLVIQ YLYYDVVGCH AVVTRDPEYN AHIAQCCARS 300 IV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.2	2e-19	C2H2 family protein