PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

PNH02044.1

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

Protein Properties

Length: 128aa MW: 14027.5 Da PI: 6.9775

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH02044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.3	3.1e-06	17	41	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C+ +F+++ nL +H rtH PNH02044.1 17 YACDypGCDAVFTQSGNLASHKRTH 41 789999******************9 PP
2	zf-C2H2	19.4	2.8e-06	47	71	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C C+ +F+++ nL++H rtH PNH02044.1 47 YACDypGCDAVFTQSGNLVHHKRTH 71 789999******************9 PP
3	zf-C2H2	18.2	7e-06	77	101	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C Cg F + nL++H rtH PNH02044.1 77 YTCDyeGCGAAFAMSGNLVHHKRTH 101 99**********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 128 aa Download sequence
MENEKLIERT HTGEKPYACD YPGCDAVFTQ SGNLASHKRT HTGEKPYACD YPGCDAVFTQ 60 SGNLVHHKRT HTGEKPYTCD YEGCGAAFAM SGNLVHHKRT HTGEKPYACD YEGCGAALVY 120 GGYTKSQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.2	6e-22	C2H2 family protein