PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH03268.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family NF-YB
Protein Properties Length: 112aa    MW: 12020.8 Da    PI: 4.4618
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH03268.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB52.89.8e-17597388
       NF-YB  3 eqdrflPianvsrimkkvlPa....nak...iskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88
                e+d  lP a v ri+k  l a    ++k   +skda   + e    fis+++s a+d cq+++r+t+n+dd+l al+++ f + v plk  l+
  PNH03268.1  5 ETDVDLPRALVKRIVKAKLTAlagdDGKefgMSKDALTALSESTKVFISLIASTANDICQEKRRQTVNADDVLTALTDMDFPELVGPLKEQLE 97
                78999***********99876222234455589*******************************************************98875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MEKPETDVDL PRALVKRIVK AKLTALAGDD GKEFGMSKDA LTALSESTKV FISLIASTAN  60
DICQEKRRQT VNADDVLTAL TDMDFPELVG PLKEQLEGAL RPGEGAFAAL CV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.14e-24NF-YB family protein