PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH04216.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family NF-YB
Protein Properties Length: 201aa    MW: 21197.3 Da    PI: 7.5089
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH04216.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1771.8e-5516110296
       NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                 reqdrflPian+srimkk+lP+naki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa++tlGfe+y+eplkvyl+k+re+ ++
  PNH04216.1  16 REQDRFLPIANISRIMKKALPGNAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMTTLGFEEYLEPLKVYLAKFREAATA 110
                 89*****************************************************************************************8765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MSADEGDARD GVSNAREQDR FLPIANISRI MKKALPGNAK IAKDAKETVQ ECVSEFISFI  60
TSEASDKCQR EKRKTINGDD LLWAMTTLGF EEYLEPLKVY LAKFREAATA KPGPGGGSGA  120
EAKREAAAAA AAAAAAASQQ HQAAQQHMAQ LQGGMPPYGL MPHQFQGLPP GMIPAGFAGL  180
PLPPGMGLLM PGGPVPKQEP K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.19e-62NF-YB family protein