PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH04309.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family MYB
Protein Properties Length: 198aa    MW: 22665.5 Da    PI: 10.3562
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH04309.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding63.64e-20145247
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     g+WT+eEd +l ++v+ +G ++W++Ia+ ++ gRt+k+c++rw++ 
       PNH04309.1  1 GPWTPEEDNILRQLVTTHGARNWTRIAEVIP-GRTGKSCRLRWLNQ 45
                     79*****************************.***********996 PP
2Myb_DNA-binding46.96.1e-155397248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     g++T eEd  ++ a+ ++G++ W++Ia++++ gRt++++k+rw +++
       PNH04309.1 53 GPFTIEEDAVILWAHSLYGNK-WASIAKHLP-GRTDNNIKNRWDQWR 97
                     79*******************.*********.***********8886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
GPWTPEEDNI LRQLVTTHGA RNWTRIAEVI PGRTGKSCRL RWLNQLSPVV KCGPFTIEED  60
AVILWAHSLY GNKWASIAKH LPGRTDNNIK NRWDQWRLAA HLRAQAAILM QRAAFNLATE  120
NTNNTNPQQQ QQQQQQQQQQ QQQQQQMQQQ MQQQQMQQQQ MQQQQMQQQQ QLNSLGGSGI  180
DPQVLAQILL LSSGAGMG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.11e-38MYB family protein