PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH04560.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family ERF
Protein Properties Length: 236aa    MW: 26058.9 Da    PI: 7.6404
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH04560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-18110160256
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                 gy+GVr+++ +g+++AeIrd       + kr ++g+f +a eAa+a+++a+++l+g+
  PNH04560.1 110 GYRGVRRRP-WGSYAAEIRDsT-----CgKRRWIGTFKSAVEAARAYDEAALALHGP 160
                 8********.**********44.....57**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MATAALVELV PDALPRGCSS RSHGTDEKPN SARSAREARM VDIYIPLHFP SGAFYSSEEE  60
HSDSLAPLTL TLGKRARDAD PDWEADQDAN GAAAGPNSTP HEAHANNKQG YRGVRRRPWG  120
SYAAEIRDST CGKRRWIGTF KSAVEAARAY DEAALALHGP RAKTNFVYDC QNRKPAPPHV  180
THRRKSDDSD CSLTAALPLA EYVAIEQQQQ QQQERPRLDA LLQVAHLFGV RDFRMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12980.11e-14ERF family protein