PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH04561.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family MYB_related
Protein Properties Length: 272aa    MW: 29710.4 Da    PI: 9.7812
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH04561.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.63.2e-09201246247
                      SSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqky 47 
                      g+WT  E+el+v   +q+G g  W + a++++ +R ++qc  ++ ++
       PNH04561.1 201 GAWTDAEHELFVATARQHGVGdKWGLFASYIP-NRVGYQCSAYYKQF 246
                      79******************************.*********99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MMTSDLDRER AARMRRNEEM LATIGVTKAL TEVLHHREGG GDGPRASRQA PSSKRGRVKA  60
VEPIRKSQRL VVAGTAQHAE EGEPEEPATT SGRGVGMTQE QYLASKGLPL PAGHFRTDGC  120
FLGWVQKDVA ARHGICSSAA EAWEQGGGGS FSRKIRKADV PTELKAKGWS DARAFAAGQL  180
RKNPNAFFYR HTAPGEEQAQ GAWTDAEHEL FVATARQHGV GDKWGLFASY IPNRVGYQCS  240
AYYKQFIIPS GLILDARFRL DAWGDAIFSG PK