PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH04821.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family bHLH
Protein Properties Length: 434aa    MW: 46059.8 Da    PI: 9.9621
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH04821.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.3e-1281126454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  h ++E+rRR riN+++e Lr+++P+a     ++ + a  Le++++YI  L
  PNH04821.1  81 RHQAAEQRRRTRINDRLELLRKIVPHA-----ERANTACFLEEVIKYIETL 126
                 599***********************9.....8***************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MQPLSLGLGL GLGQEGPSAS SLPPISLQRP GLSPGDLALL SHVAFYGGAP AAGGTGELTL  60
RGNVGATRSS DSRSSSAYAS RHQAAEQRRR TRINDRLELL RKIVPHAERA NTACFLEEVI  120
KYIETLKRRT LELEIMLADS SGGPVPQSLG QGSAGPPAPD GPTESYQSGA GPAQQQQQQQ  180
QERPHKSKSS AAAWPASLPV PGTRALSGQQ PLQQPSLPQQ PAAAAQLPRL QLQHHAVAAQ  240
QLQAQLQQAQ LQQASQPSLH PQAALFQHGG AMPSLDDASL LLGGGLSAGA LSQLTSGLQA  300
QQGQQLSHYH QLSQQQQQLN ELQTLKAMHT LQQPQQQRRS SQPAAFYPSN NKSFLHFNED  360
LFGGVKPELL PGRSLLGAAS ATPSTSLQIT TAHHLPTESN ALLHLEASRK VFSGSPVSSE  420
ECGIPLKKRK VLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.14e-09bHLH family protein