PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH04900.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family E2F/DP
Protein Properties Length: 254aa    MW: 27238.2 Da    PI: 4.8248
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH04900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP871.3e-2778143171
     E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 r+++sL++lt+kfl+l++++ +gi++ln++a++L   +v  ++RRiYDi+NVLe+++liekk+kn+irwkg
  PNH04900.1  78 RYDSSLGMLTKKFLTLINNAADGILDLNKAAETL---KV--QKRRIYDITNVLEGVGLIEKKSKNNIRWKG 143
                 6899******************************...88..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MAWGLFPSQV DSGDEDEDPH HQLEQEQDHD EEQEESYGGD GAGDDSADDM EQRTPSRGVK  60
RKAGRGAGSP GSLTSGCRYD SSLGMLTKKF LTLINNAADG ILDLNKAAET LKVQKRRIYD  120
ITNVLEGVGL IEKKSKNNIR WKGAAGGGGC DGAEAEPEAL RLKNDVLSLM DPERSPSAPR  180
RRGGALPLAL DITRTVAALL EARLEPPELT CGVGPESLPP AGHLSPRRVL EDRGARGLGP  240
EHHHTAPLRG EEEA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111117LKVQKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.39e-31E2F/DP family protein